Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855389.1_cds_XP_016512828.1_25433
CDS Infomation

[gene=LOC107829874] [db_xref=GeneID:107829874] [protein=DNA polymerase eta-like isoform X2] [protein_id=XP_016512828.1] [location=join(34763..34838,35363..35483,35589..35700,35781..35945,36419..36583,36720..36823,37074..37193,38822..38945,39161..39274,41300..41408,41501..41625,44130..44190,44298..44440,46110..46215,47044..47297)] [gbkey=CDS]
Sequence

ATGCCGGTGGCAAGGCCTGAGTCATCGGATTCTAGAGTTATTGCTCATGTCGACATGGAT
TGCTTCTATGTTCAAGTGGAGCAGCGAAAGCAACCAAGTCTAAGAGGTCAACCCGCTGCT
GTTGTACAGTACAATTCTTGGCAAGGTGGGGGGCTGATCGCTGTCAGTTATGAGGCTCGT
AAATTTGGGGTGAAGCGCTCAATGCGAGGTGATGAAGCAAAGCAAGTTTGTCCGGAGATT
CATCTTGTTCAAGTCCCAGTTGCCCGTGGTAAAGCTGACCTAAATTCTTACAGGAATGCA
GGCTCAGAGGTTGTCACCATACTTTCAAGAAGAGGCCGATGTGAGCGTGCTTCAATTGAT
GAAGTGTATTTGGATCTCACTATAGCTGCTGAAGCAATGTTGGCAGATAATCCTCCTGAG
TGCCTGGAAACAATCAGTGAAGAAGCAGTGAAATCACATGTTTTGGGTCTTGAGGTTGGT
ACCAATCCCAGAGAGAATGTCAGACATTGGCTCACCAGAAGTGACGCTAGTCGCCGTGAT
AAGTTGTTAGCCTGTGGAGCGCTTATTGTTGCAGAACTTAGGCTGCAAGTATTAGAAGAG
ACTGAATTCACTTGTTCTGCAGGCATTGCTCATAATAAGATGCTGGCCAAACTAGCAAGT
GGAATGAATAAACCTGCTCAGCAAACTTTGGTGCCTTTCTCATCCATCAGCAAATTACTC
GAAACTTTGCCTATAAAGAAAATGAAACAGCTTGGAGGAAAACTTGGAACTTCTTTGCAA
ATTGACTTAGGTGTGAACACTGTTGGGGATCTGCTCCAGTTTTCAGAAGAGAAGCTACAA
GAGTATTATGGATTAAATACTGGTTCCTGGTTATGGAATACAGCTAGGGGCATTAGTGGG
GAAGAGGTCAAGGAACGCCTTCTTCCCAACAGTCATGGTTCGGGAAAGACATTCCCTGGA
CCTCGAGCTCTCAAAACTGTTGCTTCTGTTGAAAAGTGGCTCAGTGAACTCTGCGAAGAA
CTTAGTGAACGTCTTCAGTCTGATCTAGAACAGAATAAGCGGATTGCACATACTCTTACT
CTACATGCTCAAGCACACAAGGGTACACGGTCTATCATGAATTATTTTCAAAACCAAGAG
GAAACTTACCCTCAAGTAAAACTATCCAGCGAAAAGCTTATCCAAGATGCTCCACTTTTG
TCCCCTTCAGAGAACTGTCTAGGATGTGGAGGTCATCCAACTTTGCAGTCAACAGAACAA
CTAGCACGACATGAGGAAGATAAAGAGACTAAACGTTGCATAGAGGAAGAGGACAAGGAG
ATGTGTAAAGAAAAGGGCTTTCTTTTATCACCTGAACAGCTACCAGATAAAGAGACTTTG
ATATGTTCTTCACCAGATGCTGAAGTGTATCCGAAATGGGAGAAAGAGTATCCGAGATGG
GAGAAAGATCAGACTGAATCAAGTGGGGTCTCCCTTACTGAAAAGAGTAGAGATACTTTT
GAGTCGGAGGAAGGGAAGAGGAAGTCCAATAAAGAAAAGGGAATGCAAACAATCTCGCGA
TATTTTCAAAGTCAAAACTCTGGCTCTCTCATACAGATAGAACATGCTAGCACTACTAAT
CTTAGCGAATCATCCTCCTTGTCAGGCCCTCATGGTGAACAACCTCAAGAAAATTCACTT
ACAAGGGGTGAGTCCAGTGTCGATGCACGTCTTTGCAGCCAGTTTAAAAGACCTGCCTGG
AGTTACGACATTGATGAGATTGACCAGGATGTCTTGAAGGAGTTACCAAAACAAATTCAA
GAAGAGGTACATGCATGGCTCAGGCCTCAGAAGCGATCTAATACAGTGAAAAGGGATTTA
GGTATTACTCGTTATTTCTTACCTTCAAAGGATAAATAG

Peptide Sequence

PEP ID

XP_016512828.1
PEP Infomation

PREDICTED: DNA polymerase eta-like isoform X2 [Nicotiana tabacum]
Sequence

MPVARPESSDSRVIAHVDMDCFYVQVEQRKQPSLRGQPAAVVQYNSWQGGGLIAVSYEAR
KFGVKRSMRGDEAKQVCPEIHLVQVPVARGKADLNSYRNAGSEVVTILSRRGRCERASID
EVYLDLTIAAEAMLADNPPECLETISEEAVKSHVLGLEVGTNPRENVRHWLTRSDASRRD
KLLACGALIVAELRLQVLEETEFTCSAGIAHNKMLAKLASGMNKPAQQTLVPFSSISKLL
ETLPIKKMKQLGGKLGTSLQIDLGVNTVGDLLQFSEEKLQEYYGLNTGSWLWNTARGISG
EEVKERLLPNSHGSGKTFPGPRALKTVASVEKWLSELCEELSERLQSDLEQNKRIAHTLT
LHAQAHKGTRSIMNYFQNQEETYPQVKLSSEKLIQDAPLLSPSENCLGCGGHPTLQSTEQ
LARHEEDKETKRCIEEEDKEMCKEKGFLLSPEQLPDKETLICSSPDAEVYPKWEKEYPRW
EKDQTESSGVSLTEKSRDTFESEEGKRKSNKEKGMQTISRYFQSQNSGSLIQIEHASTTN
LSESSSLSGPHGEQPQENSLTRGESSVDARLCSQFKRPAWSYDIDEIDQDVLKELPKQIQ
EEVHAWLRPQKRSNTVKRDLGITRYFLPSKDK

Transcript Sequence

Gene sequence data has not been registered.